Package: BIGDAWG 3.1.0

Steve Mack

BIGDAWG: Case-Cotrol Analysis of Multi-Allelic Loci

Data sets and functions for chi-squared Hardy-Weinberg and case-control association tests of highly polymorphic genetic data [e.g., human leukocyte antigen (HLA) data]. Performs association tests at multiple levels of polymorphism (haplotype, locus and HLA amino-acids) as described in Pappas DJ, Marin W, Hollenbach JA, Mack SJ (2016) <doi:10.1016/j.humimm.2015.12.006>. Combines rare variants to a common class to account for sparse cells in tables as described by Hollenbach JA, Mack SJ, Thomson G, Gourraud PA (2012) <doi:10.1007/978-1-61779-842-9_14>.

Authors:Derek Pappas [aut], Livia Tran [aut], Steve Mack [aut, cre], Jill Hollenbach [aut]

BIGDAWG_3.1.0.tar.gz
BIGDAWG_3.1.0.zip(r-4.7-any)BIGDAWG_3.1.0.zip(r-4.6-any)BIGDAWG_3.1.0.zip(r-4.5-any)
BIGDAWG_3.1.0.tgz(r-4.6-any)BIGDAWG_3.1.0.tgz(r-4.5-any)
BIGDAWG_3.1.0.tar.gz(r-4.7-any)BIGDAWG_3.1.0.tar.gz(r-4.6-any)
BIGDAWG_3.1.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION |NEWS
card.svg |card.png
BIGDAWG/json (API)

# Install 'BIGDAWG' in R:

install.packages('BIGDAWG', repos = c('https://igdawg.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/igdawg/bigdawg/issues

On CRAN:

5.92 score 4 stars 1 packages 4 scripts 596 downloads 7 mentions 77 exports 10 dependencies

Last updated from:7f006b2a27. Checks:3 WARNING, 2 OK, 4 FAIL. Indexed: yes.

Target	Result	Time
linux-devel	WARNING	169
source / vignettes	OK	213
linux-release	WARNING	167
macos-release	FAIL	89
macos-oldrel	FAIL	114
windows-devel	WARNING	88
windows-release	FAIL	49
windows-oldrel	FAIL	63
wasm-release	OK	135