Package 'BIGDAWG'

Title: Case-Cotrol Analysis of Multi-Allelic Loci
Description: Data sets and functions for chi-squared Hardy-Weinberg and case-control association tests of highly polymorphic genetic data [e.g., human leukocyte antigen (HLA) data]. Performs association tests at multiple levels of polymorphism (haplotype, locus and HLA amino-acids) as described in Pappas DJ, Marin W, Hollenbach JA, Mack SJ (2016) <doi:10.1016/j.humimm.2015.12.006>. Combines rare variants to a common class to account for sparse cells in tables as described by Hollenbach JA, Mack SJ, Thomson G, Gourraud PA (2012) <doi:10.1007/978-1-61779-842-9_14>.
Authors: Derek Pappas <[email protected]>, Steve Mack <[email protected]>, Jill Hollenbach <[email protected]>
Maintainer: Steve Mack <[email protected]>
License: GPL (>= 3)
Version: 3.0.8
Built: 2024-11-01 03:54:50 UTC
Source: https://github.com/igdawg/bigdawg

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